- java.lang.Object
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- ij.plugin.ZAxisProfiler
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- All Implemented Interfaces:
PlotMaker
,Measurements
,PlugIn
public class ZAxisProfiler extends java.lang.Object implements PlugIn, Measurements, PlotMaker
Implements the Image/Stacks/Plot Z-axis Profile command, which plots the selection mean gray value versus slice number.
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Field Summary
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Fields inherited from interface ij.measure.Measurements
ADD_TO_OVERLAY, ALL_STATS, AREA, AREA_FRACTION, CENTER_OF_MASS, CENTROID, CIRCULARITY, ELLIPSE, FERET, INTEGRATED_DENSITY, INVERT_Y, KURTOSIS, LABELS, LIMIT, MAX_STANDARDS, MEAN, MEDIAN, MIN_MAX, MODE, NaN_EMPTY_CELLS, PERIMETER, RECT, SCIENTIFIC_NOTATION, SHAPE_DESCRIPTORS, SKEWNESS, SLICE, STACK_POSITION, STD_DEV
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Constructor Summary
Constructors Constructor Description ZAxisProfiler()
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description Plot
getPlot()
Returns a profile plot.static Plot
getPlot(ImagePlus imp)
Returns a Plot of the selection mean gray value versus slice number.static Plot
getPlot(ImagePlus imp, java.lang.String options)
Returns a Plot of the selection mean versus slice number for the specified hyperstack, where 'options' can be "time" or "z-axis".ImagePlus
getSourceImage()
Returns the ImagePlus used to generate the profile plots.void
run(java.lang.String arg)
This method is called when the plugin is loaded.
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Method Detail
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getPlot
public static Plot getPlot(ImagePlus imp)
Returns a Plot of the selection mean gray value versus slice number.
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getPlot
public static Plot getPlot(ImagePlus imp, java.lang.String options)
Returns a Plot of the selection mean versus slice number for the specified hyperstack, where 'options' can be "time" or "z-axis".
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run
public void run(java.lang.String arg)
Description copied from interface:PlugIn
This method is called when the plugin is loaded. 'arg', which may be blank, is the argument specified for this plugin in IJ_Props.txt.
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getSourceImage
public ImagePlus getSourceImage()
Description copied from interface:PlotMaker
Returns the ImagePlus used to generate the profile plots.- Specified by:
getSourceImage
in interfacePlotMaker
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